dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000127_1|CGC4
Gene ID: MGYG000000127_00166
Location and strand information: 193228 - 195729 (-)
Family: GH39
Protein type: CAZyme
Protein description: HTH-type transcriptional activator RhaR
Protein isoelectric point: 6.1923
Protein molecular weight: 96708.89
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000127_1|CGC4
Gene ID: MGYG000000127_00167
Location and strand information: 196035 - 197549 (+)
Family: 3.A.1.2.20
Protein type: TC
Protein description: Ribose import ATP-binding protein RbsA

Gene clsuter ID: MGYG000000127_1|CGC4
Gene ID: MGYG000000127_00168
Location and strand information: 197562 - 198542 (+)
Family: 3.A.1.2.3
Protein type: TC
Protein description: Ribose import permease protein RbsC

Gene clsuter ID: MGYG000000127_1|CGC4
Gene ID: MGYG000000127_00169
Location and strand information: 198783 - 200111 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000127_1|CGC4
Gene ID: MGYG000000127_00170
Location and strand information: 200237 - 201226 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000127_1|CGC4
Gene ID: MGYG000000127_00171
Location and strand information: 201259 - 202959 (+)
Family: GH3
Protein type: CAZyme
Protein description: Beta-N-acetylglucosaminidase/beta-glucosidase
Protein isoelectric point: 4.5671
Protein molecular weight: 62340.08
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000127_1|CGC4
Gene ID: MGYG000000127_00172
Location and strand information: 202995 - 204182 (-)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000000127_1|CGC4
Gene ID: MGYG000000127_00173
Location and strand information: 204418 - 205797 (+)
Family: 2.A.2.3.6
Protein type: TC
Protein description: Isoprimeverose transporter

Gene clsuter ID: MGYG000000127_1|CGC4
Gene ID: MGYG000000127_00174
Location and strand information: 205815 - 207842 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000127_1|CGC4
Gene ID: MGYG000000127_00175
Location and strand information: 208129 - 209868 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000127_1|CGC4
Gene ID: MGYG000000127_00176
Location and strand information: 209893 - 211770 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000127_1|CGC4
Gene ID: MGYG000000127_00177
Location and strand information: 211794 - 213329 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Chemotaxis response regulator protein-glutamate methylesterase

Gene clsuter ID: MGYG000000127_1|CGC4
Gene ID: MGYG000000127_00178
Location and strand information: 213460 - 214854 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: sn-glycerol-3-phosphate-binding periplasmic protein UgpB

Gene clsuter ID: MGYG000000127_1|CGC4
Gene ID: MGYG000000127_00179
Location and strand information: 214960 - 215772 (-)
Family: 3.A.1.1.20
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000127_1|CGC4
Gene ID: MGYG000000127_00180
Location and strand information: 215769 - 216701 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: sn-glycerol-3-phosphate transport system permease protein UgpA

Gene clsuter ID: MGYG000000127_1|CGC4
Gene ID: MGYG000000127_00181
Location and strand information: 216716 - 217828 (-)
Family: 3.A.1.1.10
Protein type: TC
Protein description: sn-glycerol-3-phosphate import ATP-binding protein UgpC

Gene clsuter ID: MGYG000000127_1|CGC4
Gene ID: MGYG000000127_00182
Location and strand information: 217821 - 218660 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000127_1|CGC4
Gene ID: MGYG000000127_00183
Location and strand information: 218895 - 220199 (+)
Family: 3.A.1.1.44
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000127_1|CGC4
Gene ID: MGYG000000127_00184
Location and strand information: 220347 - 221246 (+)
Family: 3.A.1.1.25
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000000127_1|CGC4
Gene ID: MGYG000000127_00185
Location and strand information: 221262 - 222104 (+)
Family: 3.A.1.1.44
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000127_1|CGC4
Gene ID: MGYG000000127_00186
Location and strand information: 222183 - 224168 (+)
Family: GH31
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7872
Protein molecular weight: 76015.17
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000127_00166	HTH-type transcriptional activator RhaR	CAZyme	193228	195729	-	GH39
MGYG000000127_00167	Ribose import ATP-binding protein RbsA	TC	196035	197549	+	3.A.1.2.20
MGYG000000127_00168	Ribose import permease protein RbsC	TC	197562	198542	+	3.A.1.2.3
MGYG000000127_00169	hypothetical protein	null	198783	200111	+	No domain
MGYG000000127_00170	hypothetical protein	null	200237	201226	+	BPD_transp_2
MGYG000000127_00171	Beta-N-acetylglucosaminidase/beta-glucosidase	CAZyme	201259	202959	+	GH3
MGYG000000127_00172	HTH-type transcriptional activator RhaR	TF	202995	204182	-	HTH_AraC
MGYG000000127_00173	Isoprimeverose transporter	TC	204418	205797	+	2.A.2.3.6
MGYG000000127_00174	hypothetical protein	null	205815	207842	+	No domain
MGYG000000127_00175	hypothetical protein	null	208129	209868	+	AAA-ATPase_like\| PDDEXK_9
MGYG000000127_00176	hypothetical protein	TC	209893	211770	+	8.A.59.2.1
MGYG000000127_00177	Chemotaxis response regulator protein-glutamate methylesterase	TF	211794	213329	+	HTH_AraC
MGYG000000127_00178	sn-glycerol-3-phosphate-binding periplasmic protein UgpB	STP	213460	214854	-	SBP_bac_1
MGYG000000127_00179	L-arabinose transport system permease protein AraQ	TC	214960	215772	-	3.A.1.1.20
MGYG000000127_00180	sn-glycerol-3-phosphate transport system permease protein UgpA	TC	215769	216701	-	3.A.1.1.11
MGYG000000127_00181	sn-glycerol-3-phosphate import ATP-binding protein UgpC	TC	216716	217828	-	3.A.1.1.10
MGYG000000127_00182	hypothetical protein	null	217821	218660	-	Phosphodiest
MGYG000000127_00183	hypothetical protein	TC	218895	220199	+	3.A.1.1.44
MGYG000000127_00184	Lactose transport system permease protein LacF	TC	220347	221246	+	3.A.1.1.25
MGYG000000127_00185	L-arabinose transport system permease protein AraQ	TC	221262	222104	+	3.A.1.1.44
MGYG000000127_00186	hypothetical protein	CAZyme	222183	224168	+	GH31
Protein ID	Protein Name	Type	Start	End	Strand	Signature